PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Han002156
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
Family ERF
Protein Properties Length: 268aa    MW: 30316.1 Da    PI: 6.3296
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Han#S32093937PU_refUnigeneView CDS
PUT-169a-Helianthus_annuus-39738PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.72.2e-1689136253
        AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkl 53 
                + +GVr +k +g+W++eIrd + +   rkr++lg+f taeeA  a+ a +k++
  Han002156  89 KLTGVRLRK-WGKWASEIRDpF-T---RKRIWLGTFNTAEEASDAYMAKKKEF 136
                678****99.**********55.3...4********************99987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.27E-1888129No hitNo description
PROSITE profilePS5103217.08289147IPR001471AP2/ERF domain
SMARTSM003803.1E-1289152IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-1589137IPR016177DNA-binding domain
PfamPF008476.2E-990136IPR001471AP2/ERF domain
PRINTSPR003671.4E-790101IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.5E-1891138IPR001471AP2/ERF domain
PRINTSPR003671.4E-7112128IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MATDLRVSKR FRNSTVTGDA SAIIGTNLRK VRVICSDPEA TDSSSDEEDC DRSQSGRRIV  60
CEIVIGAKPE EDGEVLERKE GLEEERKKKL TGVRLRKWGK WASEIRDPFT RKRIWLGTFN  120
TAEEASDAYM AKKKEFQARR VDLVNQNRQK LSKCEVGNGP VHWKKRWRGS VYDPARKQDV  180
DSDLEEEALK ALESMKRAQL SEVKSPKTEQ LSGGETGESN SGTTSVEDSR EEENMPPWMG  240
LGIDMLVIDN HGHLLGKFSR LDDDLKIC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.28e-17ERF family protein